=======
Modules
=======


Pad Dump File
--------------------

.. autofunction:: gbpy.pad_dump_file.p_arr

.. autofunction:: gbpy.pad_dump_file.pad_dump_file

.. autofunction:: gbpy.pad_dump_file.GB_finder

.. autofunction:: gbpy.pad_dump_file.num_rep_2d

.. autofunction:: gbpy.pad_dump_file.pad_gb_perp

.. autofunction:: gbpy.pad_dump_file.create_imgs

.. autofunction:: gbpy.pad_dump_file.slice_along_planes

.. autofunction:: gbpy.pad_dump_file.del_inds

.. autofunction:: gbpy.pad_dump_file.inds_to_keep


vv props
--------------------

.. autofunction:: gbpy.vv_props.Circum_O_R

.. autofunction:: gbpy.vv_props.triang_inds

.. autofunction:: gbpy.vv_props.vv_props

.. autofunction:: gbpy.vv_props.wrap_cc



Utility Function
--------------------

.. autofunction:: gbpy.util_funcs.compute_ovito_data

.. autofunction:: gbpy.util_funcs.identify_pbc

.. autofunction:: gbpy.util_funcs.box_size_reader

.. autofunction:: gbpy.util_funcs.define_bounds

.. autofunction:: gbpy.util_funcs.RemProb

.. autofunction:: gbpy.util_funcs.RemIns_decision

.. autofunction:: gbpy.util_funcs.radi_normaliz

.. autofunction:: gbpy.util_funcs.choos_rem_ins

.. autofunction:: gbpy.util_funcs.atom_insertion

.. autofunction:: gbpy.util_funcs.atom_removal

.. autofunction:: gbpy.util_funcs.cal_area

.. autofunction:: gbpy.util_funcs.cal_GB_E

.. autofunction:: gbpy.util_funcs.p_boltz_func

.. autofunction:: gbpy.util_funcs.decide

.. autofunction:: gbpy.util_funcs.check_SC_reg

.. autofunction:: gbpy.util_funcs.add_sc


Lammps Dump Writer
--------------------

.. autofunction:: gbpy.lammps_dump_writer.lammps_box

.. autofunction:: gbpy.lammps_dump_writer.box_bound_func

.. autofunction:: gbpy.lammps_dump_writer.write_lammps_dump


Lammps Script Writer
--------------------

.. autofunction:: gbpy.lammps_script_writer.file_gen

.. autofunction:: gbpy.lammps_script_writer.run_lammps_anneal

.. autofunction:: gbpy.lammps_script_writer.run_lmp